🧬 PseudoScope

Interactive sample reports – Pseudomonas aeruginosa
MLST • O Serotypes • AMR • Virulence • Biocides • Heavy Metals • Plasmids • Mutations • v1.2.0
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Sample‑Centric Report

Each isolate presented as an interactive box with typing badges (ST, O serotype), AMR, virulence, biocides, heavy metals, plasmids, and mutations. Perfect for clinical review.

MLST O Serotype AMR Virulence Biocides Heavy Metals Mutations
Interactive isolate boxes • Horizontally scrollable tables • Filter by database
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Gene‑Centric Report

Every AMR, virulence, biocide, heavy metal, or plasmid gene shown with all genomes that carry it. Dynamic grouping by typing reveals clonal associations and outbreak patterns.

Group by ST O Serotype Combinations Co‑occurrence
Groupable tables • Co‑occurrence analysis • Exportable CSV
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Visual Dashboard

Interactive visualizations including MLST & Serotype distributions, top AMR & Virulence genes, stacked bar charts, gene co‑occurrence networks, and Principal Component Analysis (PCA) of gene profiles.

MLST Distribution Serotype Distribution Top AMR/Virulence Stacked Bar Charts Gene Co‑occurrence Network PCA
Interactive plots • Network visualization • PCA clustering
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