StaphScope – Sample Reports

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Comprehensive Report

MLST, spa typing, SCCmec typing combined in a single HTML page. Includes typing summaries, sample overview, and lineage reference.

MLST spa SCCmec Agr MRSA/MSSA

Unified typing summary • Cross‑table links

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Every AMR, virulence, BACMET, plasmid, or mutation shown with all genomes that carry it. Dynamic grouping by typing reveals clonal associations.

Group by ST spa SCCmec Agr Combinations

Groupable tables • Co‑occurrence analysis • Exportable CSV

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Each isolate presented as an interactive box with typing badges, AMR, virulence, BACMET, plasmids, and mutations. Perfect for clinical review.

MRSA/MSSA Agr AMR Virulence Mutations

Interactive isolate boxes • Horizontally scrollable tables • Filter by database

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