Quick pick — 35 clinically-prioritised AMR genes
Pick up to 5 genes. Match ALL = samples must carry every selected gene.
About this module
Retrieval of Acinetobacter baumannii genomes by
AMR. Pick up to five genes, choose
ANY or ALL, and export the
accession list — ready for
datasets download genome accession --inputfile list.txt.
Source
Gene presence/absence derived from Shelenkov et al.'s A. baumannii genomic dataset (Zenodo 10.5281/zenodo.19186935).
How to use it
- Click a chip or use All Genes to find a specific gene
- Add up to 5 genes
- Switch between Match ANY and Match ALL
- Click 🧬 Accessions to download
- TSV / CSV / JSON exports include country, source, and year per genome
Data coverage
- 59,160 A. baumannii genomes in the collection
- 35 curated AMR genes
Full data download
Complete presence matrix: amr_all.tsv.gz (via Downloads).