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E. coli Library for Integrated Pathogen Surveillance and Epidemiology
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🧬 TYPING MODULE
MLST Typing
Multi-Locus Sequence Typing · Achtman 7-gene scheme
Tip:
ST131
for exact ST ·
B2
for phylogroup ·
blood
for source
Sequence Type
All
ST167
Not Assigned
ST131
ST10
ST58
ST354
ST38
ST648
ST9438
ST405
ST617
ST69
ST1284
ST410
ST155
ST1894
ST1611
ST1727
ST540
ST1193
ST1665
ST44
ST442
ST14940
ST2520
ST43
ST46
ST73
ST11025
ST218
ST101
ST12
ST224
ST226
ST156
ST349
ST448
ST48
ST1642
ST23
ST40
ST1079
ST1294
ST392
ST450
ST62
ST940
ST127
ST14931
ST164
ST216
ST2598
ST297
ST348
ST746
ST8677
ST90
ST1141
ST117
ST14937
ST16465
ST2083
ST278
ST295
ST457
ST501
ST8777
ST906
ST998
ST11407
ST1196
ST129
ST14927
ST162
ST165
ST181
ST2325
ST2522
ST3088
ST34
ST4981
ST542
ST57
ST641
ST744
ST115
ST120
ST1286
ST1421
ST14930
ST15201
ST15237
ST206
ST2695
ST3032
ST3075
ST3497
ST3580
ST361
ST362
ST382
ST394
ST398
ST4450
ST70
ST711
ST770
ST783
ST8535
ST937
ST9759
ST10306
ST1056
ST1057
ST111
ST11583
ST1178
ST1288
ST134
ST13846
ST14216
ST14217
ST1431
ST14932
ST14933
ST14934
ST14935
ST14936
ST14939
ST1629
ST1638
ST1722
ST196
ST205
ST2521
ST301
ST336
ST359
ST3877
ST393
ST4096
ST4243
ST443
ST504
ST5303
ST533
ST5937
ST602
ST609
ST6175
ST6359
ST636
ST6402
ST642
ST7061
ST708
ST716
ST718
ST7326
ST8149
ST8761
ST95
ST9580
ST1011
ST10648
ST10654
ST10955
ST11
ST1139
ST1147
ST11584
ST1161
ST1163
ST11659
ST11732
ST1176
ST1177
ST12435
ST12436
ST126
ST1312
ST13159
ST135
ST1380
ST14
ST1408
ST14110
ST1415
ST1463
ST1485
ST14928
ST14929
ST14941
ST14943
ST14944
ST15139
ST15141
ST15142
ST15143
ST152
ST15257
ST15503
ST15564
ST1564
ST159
ST16469
ST16578
ST16581
ST1711
ST1717
ST191
ST1914
ST1955
ST2005
ST2008
ST202
ST2020
ST215
ST223
ST2279
ST2349
ST2350
ST2356
ST2491
ST2505
ST2526
ST2622
ST2705
ST2714
ST2803
ST2852
ST2973
ST315
ST316
ST3202
ST3268
ST329
ST345
ST3489
ST3494
ST351
ST357
ST3572
ST363
ST3696
ST381
ST3873
ST3889
ST3998
ST4038
ST4074
ST409
ST4092
ST4162
ST4213
ST424
ST428
ST449
ST45
ST452
ST4577
ST4619
ST4623
ST4681
ST4741
ST484
ST4957
ST4977
ST500
ST515
ST5307
ST537
ST539
ST543
ST5614
ST5897
ST59
ST5979
ST6151
ST6197
ST6332
ST6420
ST6448
ST656
ST6629
ST6647
ST6648
ST6721
ST6749
ST678
ST6826
ST683
ST6856
ST710
ST7459
ST757
ST7631
ST77
ST8097
ST8749
ST88
ST8901
ST9062
ST9063
ST9278
ST9286
ST93
ST9550
ST9629
ST9640
Lineage
All
—
ST131
ST10
ST38
ST648
ST405
ST69
ST410
ST1193
ST73
ST12
ST95
ST14
Phylogroup
All
A
B1
B2
D
F
C
E
Not Assigned
G
Status
All
Assigned
Not Assigned
Country
All
Tanzania
Niger
Jordan
Rwanda
United States
Mozambique
Ghana
Ethiopia
Nigeria
—
Sudan
Mali
Malawi
Senegal
Egypt
Kenya
South Africa
United Kingdom
Gambia
Australia
Tunisia
Source
All
gastrointestinal
urinary
—
animal/livestock
skin/wound
respiratory
culture/lab
environmental
blood
food
HVS
Mashed product
fecal sample
bed
hand
Caecum
tap
alfalfa sprout
bagged lettuce
bodily fluid
dripstand
lettuce
mediteranean mussel
Collection Year
All
—
2021
2016
2014
2015
2022
2017
2013
2019
2018
2023
2020
2012
2009
2003
2004
2006
2010
⚙ Columns
0 selected
Visible rows
Selected rows
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